BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D02SP1|AL427748
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 1295 0.0
3x_Contig1080 269 1e-71
>3x_Contig1247
Length = 7218
Score = 1295 bits (651), Expect = 0.0
Identities = 822/881 (93%)
Strand = Plus / Plus
Query: 53 tttcaaagtagaatacttgtcagtgatgaagatttcatctcttggcttctttgtatcctt 112
||||||| || ||||||| ||| | || || |||||||||| | ||||||| |||||||
Sbjct: 237 tttcaaattataatacttttcatttattaatatttcatctcatttcttctttttatcctt 296
Query: 113 caaagcggcacccaattcaggataagttctgtatatctctgcagcatcaatgtgcacaac 172
|||| | |||||||| || |||| |||| |||||| || || || |||| | ||||||
Sbjct: 297 caaatcttcacccaatacattataatttctttatatcacttcatcaccaattttcacaac 356
Query: 173 acctgggacagtatccaatgttttcttcacaatatcaaccaatggttgggagaaagtggc 232
|||| ||| |||||||| ||||||||||||||||||||||| || | ||| | |
Sbjct: 357 accttttacattatccaattttttcttcacaatatcaaccaattttttttataaattttc 416
Query: 233 atctgtctcctcgcttttgtaccaagcagtacctgtacctacaatagcaactgcaggaat 292
|||| ||||||| ||||| |||||| || ||||| ||||||||||| ||||| || |||
Sbjct: 417 atctttctcctctcttttttaccaatcattacctttacctacaatatcaacttcattaat 476
Query: 293 cttatttccattagacaaagtaaagaacttttgagtagtcatgatattaattataagcct 352
||||||||||||| ||||| |||| ||||||| | || |||| |||||||||||||||||
Sbjct: 477 cttatttccattatacaaattaaataactttttattattcattatattaattataagcct 536
Query: 353 ggtgaacctgatgaatgtggtttccgacggtgtggaatgcttattagtgttgaatgaagt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 ggtgaacctgatgaatgtggtttccgacggtgtggaatgcttattagtgttgaatgaagt 596
Query: 413 aacaattgamattgtatagacaacaattgatttccgctcccaacagttgtattagggtat 472
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aacaattgaaattgtatagacaacaattgatttccgctcccaacagttgtattagggtat 656
Query: 473 aamaacgctccccttttatatgttcggctcaaattgatgcaaccgcagttgccggtgtcg 532
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 aaaaacgctccccttttatatgttcggctcaaattgatgcaaccgcagttgccggtgtcg 716
Query: 533 agttaacaatcgcgtgctaacttttcccttaataatgtcttttttatgtctttttgttca 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 agttaacaatcgcgtgctaacttttcccttaataatgtcttttttatgtctttttgttca 776
Query: 593 gtattggccttgctgttgtctttacatctctatgactcttgaaccttaattactaatcaa 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gtattggccttgctgttgtctttacatctctatgactcttgaaccttaattactaatcaa 836
Query: 653 gaaaagtgccactgattaagccacaaatatacagtactgacgaaattactgtgtttaacg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gaaaagtgccactgattaagccacaaatatacagtactgacgaaattactgtgtttaacg 896
Query: 713 attactttcgtaatgacgccaagattgawaggaattgcaagtcagtcaaagtcttcagtt 772
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 897 attactttcgtaatgacgccaagattgaaaggaattgcaagtcagtcaaagtcttcagtt 956
Query: 773 tttttatgagtcaattgatttgcataatcgtttgctactatatatcagtgtttattgaaa 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 tttttatgagtcaattgatttgcataatcgtttgctactatatatcagtgtttattgaaa 1016
Query: 833 atgtgaatatattatatacgtaatgaactgtttaaagtacgttttgggatctatacatag 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 atgtgaatatattatatacgtaatgaactgtttaaagtacgttttgggatctatacatag 1076
Query: 893 aaagcttgttctcctaccctatgtgttgtacattgtctgtc 933
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 aaagcttgttctcctaccctatgtgttgtacattgtctgtc 1117
>3x_Contig1080
Length = 4249
Score = 269 bits (135), Expect = 1e-71
Identities = 153/159 (96%)
Strand = Plus / Minus
Query: 2 gagcatcttcaaaaatgtctctaaggcaactttagggttttttgaaagctgtttcaaagt 61
|||| ||||||| ||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 168 gagcttcttcaatgatgtctctaaggcaactttagggttctcagaaagctgtttcaaagt 109
Query: 62 agaatacttgtcagtgatgaagatttcatctcttggcttctttgtatccttcaaagcggc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 agaatacttgtcagtgatgaagatttcatctcttggcttctttgtatccttcaaagcggc 49
Query: 122 acccaattcaggataagttctgtatatctctgcagcatc 160
|||||||||||||||||||||||||||||||||||||||
Sbjct: 48 acccaattcaggataagttctgtatatctctgcagcatc 10
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7151
Number of Sequences: 1807
Number of extensions: 7151
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 2
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)